miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|35072463|gb|CA159766.1|CA159766 AGGTAAAAGATTTAACTAATGACACAGTTTGGTTGTAAATCACGAGACGAATCTTTTGAGCCCAATTAGTCTATGATTGA
ACATTATTTGCCAAATACAAACGAAAGCGCTACAATGGCAAAATACTGATAAATATTTTTGCATCTAAACACCCCCTTAT
TCGCTTCTTCCAATGCTTTGCAACATGCGGATTAGGGAGGGTACCTTTCATCAAAATATCCCTGCTGCAACTGAAAGGTA
TTGAACGTTGTTCTTGTACAGTACATTACAACCGGGCTTTGGCTAGCGCGGCGGGCTTGAAGCTCGTGATCCCGGTGATC
TCTCTGGCGGTCACCAGGCTGTTGATGTCGTATGTGCCTTCGTACGAGTAAATTGGCTCCAGGTCGCAGAACGCCTTTGC
CACAAGGAAATCGGCCAAAATTCCGTTCCCACCCAGCAGCTCTCGGCCAAGGGAAACCACCTCGCGGGCCATCCTGGAGT
TCCAAGCCTTCCCTAGGCTAGCGTGGCCTGGCGTCATTTTCCCCGACTCGTAAAGCTTGCAGAGGCGCCAGCCAACAAGG
AGCATCGATTGGACGTTACCGAGCATCCGGACAAGTTT




Most similar to sp|Q96329|ACOX4_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal
           OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1
          Length = 436

 Score =  181 bits (458), Expect = 4e-45
 Identities = 86/107 (80%), Positives = 96/107 (89%)
 Frame = -1

Query: 598 KLVRMLGNVQSMLLVGWRLCKLYESGKMTPGHASLGKAWNSRMAREVVSLGRELLGGNGI 419
           KLV+MLGNVQ+M L+GWRLCKLYE+G+MTPG ASLGKAW S  ARE  SLGRELLGGNGI
Sbjct: 329 KLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLGGNGI 388

Query: 418 LADFLVAKAFCDLEPIYSYEGTYDINSLVTAREITGITSFKPAALAK 278
           LADFLVAKAFCDLEPIY+YEGTYDIN+LVT RE+TGI SFKPA  ++
Sbjct: 389 LADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIASFKPATRSR 435